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1

Role of Aromatic Side Chains in the Folding and Thermodynamic Stability of Integral Membrane Proteins

Hong, Heedeok, Park, Sangho, Flores Jiménez, Ricardo H., Rinehart, Dennis, Tamm, Lukas K.

Journal:

Journal of the American Chemical Society

Year:

2007

Language:

english

File:

PDF, 693 KB

english, 2007

2

Electrostatic couplings in OmpA ion-channel gating suggest a mechanism for pore opening

Hong, Heedeok, Szabo, Gabor, Tamm, Lukas K

Journal:

Nature Chemical Biology

Year:

2006

Language:

english

File:

PDF, 558 KB

english, 2006

3

Dynamic equilibrium unfolding pathway of human tumor necrosis factor-α induced by guanidine hydrochloride

Yong-Rok Kim, Joong-Sik Hahn, Heedeok Hong, Woojin Jeong, Nam Woong Song, Hang-Cheol Shin, Dongho Kim

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1999

Language:

english

File:

PDF, 377 KB

english, 1999

4

Folding and assembly of β-barrel membrane proteins

Lukas K. Tamm, Heedeok Hong, Binyong Liang

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2004

Language:

english

File:

PDF, 712 KB

english, 2004

5

Measuring the Thermodynamic Stability of Strong Protein-Protein Interactions in Lipid Bilayers Using a Steric Trap

Hong, Heedeok, Blois, Tracy M., Bowie, James U.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 35 KB

english, 2010

6

Studying Membrane Protein Thermodynamics Using a Steric Trap

Blois, Tracy M., Hong, Heedeok, Kim, Tae H., Bowie, James U.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 35 KB

english, 2010

7

Membrane Depth-Dependent Energetic Contribution of the Tryptophan Side Chain to the Stability of Integral Membrane Proteins

Hong, Heedeok, Rinehart, Dennis, Tamm, Lukas K.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.12 MB

english, 2013

8

Dramatic Destabilization of Transmembrane Helix Interactions by Features of Natural Membrane Environments

Hong, Heedeok, Bowie, James U.

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 1.95 MB

english, 2011

9

Protein Unfolding with a Steric Trap

Blois, Tracy M., Hong, Heedeok, Kim, Tae H., Bowie, James U.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 1.19 MB

english, 2009

10

Toward understanding driving forces in membrane protein folding

Journal:

Archives of Biochemistry and Biophysics

Year:

2014

Language:

english

File:

PDF, 4.03 MB

english, 2014

11

[Methods in Enzymology] Biothermodynamics, Part A Volume 455 || Chapter 8 Methods for Measuring the Thermodynamic Stability of Membrane Proteins

Year:

2009

Language:

english

File:

PDF, 593 KB

english, 2009

12

The Outer Membrane Protein OmpW Forms an Eight-stranded β-Barrel with a Hydrophobic Channel

Hong, Heedeok, Patel, Dimki R., Tamm, Lukas K., van den Berg, Bert

Journal:

Journal of Biological Chemistry

Year:

2006

Language:

english

File:

PDF, 1.80 MB

english, 2006

13

Method to measure strong protein-protein interactions in lipid bilayers using a steric trap

Heedeok Hong, Tracy M. Blois, Zheng Cao, James U. Bowie and David Baker

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.28 MB

english, 2010

14

Steric trapping reveals a cooperativity network in the intramembrane protease GlpG

Guo, Ruiqiong, Gaffney, Kristen, Yang, Zhongyu, Kim, Miyeon, Sungsuwan, Suttipun, Huang, Xuefei, Hubbell, Wayne L, Hong, Heedeok

Journal:

Nature Chemical Biology

Year:

2016

Language:

english

File:

PDF, 1.62 MB

english, 2016

15

Developing a Universal Steric Trapping Strategy for Studying Folding and Stability of Helical Membrane Proteins

Guo, Ruiqiong, Gaffney, Kristen A., Huang, Xuefei, Hong, Heedeok

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 41 KB

english, 2015

16

General Steric Trapping Strategy Reveals an Intricate Cooperativity Network in the Intramembrane Protease GlpG under Native Conditions

Guo, Ruiqiong, Gaffney, Kristen, Yang, Zhongyu, Kim, Miyeon, Sungsuwan, Suttipun, Huang, Xuefei, Hubbell, Wayne L., Hong, Heedeok

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 45 KB

english, 2016

17

Reconstitution of FtsH-Mediated Membrane Protein Degradation in Bicelles

Yang, Yiqing, Kim, Miyeon, Guo, Ruiqiong, Gaffney, Kristen, Hong, Heedeok

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 50 KB

english, 2017

18

Dissecting the Side Chain Interaction Energies of the Active Site Hydrogen Bond Network in a Rhomboid Protease GlpG

Gaffney, Kristen A., Cho, Jeff, Hong, Heedeok

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 50 KB

english, 2017

19

The Role of Packing Defects in the Stability and Function of the Intramembrane Protease GlpG

Guo, Ruiqiong, Cang, Zixuan, Erin, Deans, Wei, Guowei, Hong, Heedeok

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 50 KB

english, 2017

20

Folding-Degradation Relationship of a Membrane Protein Mediated by the Universally Conserved ATP-dependent Protease FtsH

Yang, Yiqing, Guo, Ruiqiong, Gaffney, Kristen, Kim, Miyeon, Muhammednazaar, Shaima, Tian, Wei, Wang, Boshen, Liang, Jie, Hong, Heedeok

Journal:

Journal of the American Chemical Society

Year:

2018

Language:

english

File:

PDF, 6.33 MB

english, 2018

21

Native proteomics in discovery mode using size exclusion chromatography-capillary zone electrophoresis-tandem mass spectrometry

Shen, Xiaojing, Kou, Qiang, Guo, Ruiqiong, Yang, Zhichang, Chen, Daoyang, Liu, Xiaowen, Hong, Heedeok, Sun, Liangliang

Journal:

Analytical Chemistry

Year:

2018

Language:

english

File:

PDF, 672 KB

english, 2018

22

The rhomboid protease GlpG has weak interaction energies in its active site hydrogen bond network

Gaffney, Kristen A., Hong, Heedeok

Journal:

The Journal of General Physiology

Year:

2018

Language:

english

File:

PDF, 1.61 MB

english, 2018

23

Proteolysis mediated by the membrane‐integrated ATP‐dependent protease FtsH has a unique nonlinear dependence on ATP hydrolysis rates

Yang, Yiqing, Gunasekara, Mihiravi, Muhammednazaar, Shaima, Li, Zhen, Hong, Heedeok

Journal:

Protein Science

Year:

2019

Language:

english

File:

PDF, 1.89 MB

english, 2019

24

Proteolysis mediated by the membrane‐integrated ATP‐dependent protease FtsH has a unique nonlinear dependence on ATP hydrolysis rates

Yang, Yiqing, Gunasekara, Mihiravi, Muhammednazaar, Shaima, Li, Zhen, Hong, Heedeok

Journal:

Protein Science

Year:

2019

File:

PDF, 1.89 MB

2019

25

Structural cavities are critical to balancing stability and activity of a membrane-integral enzyme

Guo, Ruiqiong, Cang, Zixuan, Yao, Jiaqi, Kim, Miyeon, Deans, Erin, Wei, Guowei, Kang, Seung-gu, Hong, Heedeok

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 2.38 MB

2020

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